chore: add hooks, CI/CD infrastructure, ignore runtime JSON

- Transfer Claude Code hooks from internal: identity injector, email
  notification, auto-fix diagnostics, pre-compact recovery
- Add notification sounds for tool use, stop, and alerts
- Wire all hooks in .claude/settings.json
- Add global system prompt (.aipass/aipass_global_prompt.md)
- Add branch-local prompt placeholders for all modules
- Set up CI pipeline: lint (ruff) → test matrix (3.10-3.13) → coverage
- Add workflows: PyPI publish, security scanning, stale issues
- Add GitHub issue templates, dependabot, editorconfig
- Configure pytest norecursedirs and coverage fail-under=70
- Add *.json to gitignore — runtime JSON files constantly change
- Untrack runtime JSON (registry, plans, seed bypass, module data)
- Keep source JSON tracked via negation rules (json_templates, pack,
  spawn templates, settings, pyrightconfig)

Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>

.github/workflows/ci.yml

@@ -7,27 +7,50 @@ on:
     branches: [main]
 
 jobs:
-  test:
+  lint:
     runs-on: ubuntu-latest
-    strategy:
-      matrix:
-        python-version: ["3.10", "3.11", "3.12", "3.13"]
-
     steps:
       - uses: actions/checkout@v4
+      - uses: actions/setup-python@v5
+        with:
+          python-version: "3.13"
+      - run: pip install ruff
+      - run: ruff check src/ tests/
+      - run: ruff format --check src/ tests/
 
-      - name: Set up Python ${{ matrix.python-version }}
-        uses: actions/setup-python@v5
+  test:
+    needs: lint
+    strategy:
+      fail-fast: false
+      matrix:
+        python-version: ["3.10", "3.11", "3.12", "3.13"]
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v4
+      - uses: actions/setup-python@v5
         with:
           python-version: ${{ matrix.python-version }}
-
-      - name: Install dependencies
-        run: |
+      - run: |
           python -m pip install --upgrade pip
           pip install -e ".[dev]"
+      - run: coverage run -m pytest -v --tb=short --rootdir=.
+      - run: coverage report --fail-under=70
 
-      - name: Lint
-        run: ruff check src/ tests/
-
-      - name: Test
-        run: pytest
+  coverage:
+    name: coverage
+    needs: [test]
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v4
+      - uses: actions/setup-python@v5
+        with:
+          python-version: "3.13"
+      - run: |
+          python -m pip install --upgrade pip
+          pip install -e ".[dev]"
+      - run: coverage run -m pytest --rootdir=.
+      - run: coverage xml
+      - uses: codecov/codecov-action@v4
+        with:
+          files: ./coverage.xml
+          fail_ci_if_error: false

.github/workflows/publish.yml

@@ -0,0 +1,34 @@
+name: Publish to PyPI
+
+on:
+  push:
+    tags:
+      - "v*"
+
+jobs:
+  build:
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v4
+      - uses: actions/setup-python@v5
+        with:
+          python-version: "3.13"
+      - run: pip install build
+      - run: python -m build
+      - uses: actions/upload-artifact@v4
+        with:
+          name: dist
+          path: dist/
+
+  publish:
+    needs: build
+    runs-on: ubuntu-latest
+    environment: release
+    permissions:
+      id-token: write
+    steps:
+      - uses: actions/download-artifact@v4
+        with:
+          name: dist
+          path: dist/
+      - uses: pypa/gh-action-pypi-publish@release/v1

.github/workflows/security.yml

@@ -0,0 +1,33 @@
+name: Security Scan
+
+on:
+  push:
+    branches: [main]
+  pull_request:
+    branches: [main]
+  schedule:
+    - cron: "0 6 * * 1"
+
+jobs:
+  dependency-scan:
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v4
+      - uses: actions/setup-python@v5
+        with:
+          python-version: "3.13"
+      - run: pip install pip-audit
+      - run: pip install -e .
+      - name: Pip audit
+        run: pip-audit --skip-editable
+
+  codeql:
+    runs-on: ubuntu-latest
+    permissions:
+      security-events: write
+    steps:
+      - uses: actions/checkout@v4
+      - uses: github/codeql-action/init@v3
+        with:
+          languages: python
+      - uses: github/codeql-action/analyze@v3

.github/workflows/stale.yml

@@ -0,0 +1,17 @@
+name: Stale Issues
+
+on:
+  schedule:
+    - cron: "0 0 * * 1"
+
+jobs:
+  stale:
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/stale@v9
+        with:
+          stale-issue-message: "This issue has been inactive for 30 days. It will be closed in 7 days if no further activity occurs."
+          days-before-stale: 30
+          days-before-close: 7
+          stale-issue-label: "stale"
+          exempt-issue-labels: "pinned,security,high-priority"